API Reference

This API is split into module-focused pages.

• Transforms
  • Base classes
    • Transform
    • PointTransform
    • AffineTransform
    • PointTransformNoAnalyticInverse
  • Parametric transforms
    • RigidParametric
    • AffineParametric
    • MatrixParametric
    • FlipParametric
    • RescaleParametric
    • TranslateParametric
  • Point-based transforms
    • Identity
    • Translate
    • Rigid
    • Affine
    • LaminarAffine
    • Triangulation
    • LaminarTriangulation
  • Deprecated transforms
    • Flip
    • DistanceWeightedAverageGaussian
• Graphs
  • Graph
    • Graph.__init__()
    • Graph.save()
    • Graph.load()
    • Graph.add_node()
    • Graph.remove_node()
    • Graph.replace_node_image()
    • Graph.add_edge()
    • Graph.remove_edge()
    • Graph.connected_components()
    • Graph.unload()
    • Graph.get_chain()
    • Graph.get_transform()
    • Graph.has_transform()
    • Graph.get_image()
    • Graph.visualise()
  • load()
  • TransformGraph
• GUI
  • GraphViewer
    • GraphViewer.__init__()
    • GraphViewer.add_image()
    • GraphViewer.add_labels()
    • GraphViewer.add_points()
  • alignment_gui()
  • align_interactive_text()
  • align_interactive()
• Utilities
  • phase_correlation()
  • rotation_matrix()
  • blit()
  • bake_images()
  • absolute_coords_to_voxel_coords()
  • voxel_coords_to_absolute_coords()
  • crop_to_intersection()
  • load_image()
  • image_is_label()
  • compress_image()
  • decompress_image()
  • invert_function_numerical()
  • invert_transform_numerical()
  • compose_transforms()
• Shifted Arrays
  • ndarray_shifted